The thread is from 6 years ago. Much of the discussion is about the difficulties specific to 1st gen with the 3.5, and that access issues are different enough (simpler?) on 2nd gen so as to make advice about access not very useful (for this 1st gen thread).
Regarding your last sentence, if I'm reading you correctly, the very best advice (applicable to both 1st and 2nd gens) is to completely do one side (bolt and bushing), then do the other - IOW, never have both inner tie rod bolts out at the same time, otherwise (see illustration, below) the spacer block (hidden inside the rubber sleeve/cover) can slip out of place side-to-side relative to the two bolt holes in the rack main rod (also hidden inside the rubber sleeve/cover), and it can be a PITA to get the holes in the spacer block, the rubber sleeve/cover, and the rack main rod all three lined up with each other to get the first bolt properly installed. (To get the two-holed bushing kit washer plate and locking plate swapped in, you have to play games with letting the old and new plates dangle by one bolt hole and one bolt at a time, then remove the other bolt, pivot the washer and locking plates in place for the second bolt, and reinstall the second bolt - the idea, again, being to never have both bolts removed at the same time)
Exploded view of rack (I added the red and green arrows indicating the spacer block and main rod bolt holes):